Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015846936.1_cds_XP_016509835.1_22736
CDS Infomation

[gene=LOC107827253] [db_xref=GeneID:107827253] [protein=magnesium-transporting ATPase, P-type 1-like] [protein_id=XP_016509835.1] [location=join(30578..30740,31502..31618,32713..32939,33030..33241,33322..33424,33804..34174,34347..34845,35177..36322)] [gbkey=CDS]
Sequence

ATGTGGTTACCCAATATTTTCTCTGCAAATCACCCTAAAATACCTTATTATAATTCTCCT
TTGATTCACCAAAATCTTGTTCATAAACTCAATGGACAAACCCAACATAATGGACCCAAA
ATTAATGTTGTGTTTCGTTTCTTGCAAAGGCTCACTTCTGGAAAGAAAATTGATGGAGGG
TCAAGAACTGTAGAAGAAGAGAAGTTGTATTCTTGGCTGTATGCTTTGGCTCAATCTGAG
AAAGACTTGGTGTATGAGTATGTTCGATCCACCGAAAGAGGCTTGAGCTTTGCTGAAGCT
GACAGAAGACTTAAAGAATCTGGCCCAAATATTCCTCTTGAGAATACTTTCCCAAAGTGG
TGGAATCTTCTGTGGATTGCTTCATTCCATCCTTTTAACATCATTCTTCTTTTCCTCTCA
GTAATCTCTTATATTACAAGTGACAGTCCAAATGGCTGTATCATGCTCATATTAGTCTTC
ATAAGCGTCTCTTTCCGCTTTTACCAGGAATACAGCAGCTCAAAAGCAGCAATGAAGCTT
GCAGAGTTTGTTAGGTGTCCTATAAAGGTTCAACGATGTGCTGGTAGAATTTTTCAGACT
GAAGTACAGGTTAAAGTTGATCAAAAAGAAGTTGTACCAGGCGATATCGTAATCGTTGAA
CCAGGGGATCTTTTCCCCGGTGATGTGAGGCTTCTTGAATCAAAGCACCTAGTTGTCAGT
CAATCTTCACTAACAGGCGAATCTGACACGACTGAGAAAACAGCTTACGTGAGAGAAGAT
AACAGCACTCCATTGCTTGATCTAAAAAACATATGCTTTATGGGAACAAGTGTGGTGTCT
GGTAGTGGAACCGGTCTGGTTATCTCTACCGGCTTAAAGACGTACCTCAGCACAATCTTT
TCAAAAATAGGGAAGAAAAGGCCACCAGATGATTTCGAGAAAGGCATCCGCCACATATCG
TATGTGCTTATCAGTGTCATGCTCGTTGTGGTTACAGTTATCGTCCTATCCGTTTACTTT
ACATCACATGATCTGAGTAAGAGCATACTATTTGGAATATCAGTTGCAAGTGCACTTACC
CCTCAAATGCTTCCCCTTATTGTGAATACTGGTCTTGCGAAAGGAGCTCTTGCCATGGCC
AAAGATAGATGTATAGTTAAGAGCTTAACTGCTATACGAGACATGGGATCCATGGATATA
ATATGCATAGATAAGACTGGTACACTGACGGTGAATTTTTCGACCATGGTTAATTACTTT
GATAGTTGGGGTTCACCAAATGAAACCGTCCTACACTTTGGTTTCTTGAATGCTTACTTT
CAAAACCAAAATAAGTATCCTCTGGATGACGCGATTATGGCATATGCATATACAAATGGA
TACAAGTTTAAGCCCTCGAAGTGGAATAAGATAGATGAGATTCCCTTTGATTTTACAAGA
AGAAGAGTATCTGTTATATTGGAAACCAAGATGAGCGCCAAAGACGAACAAATGAGTATT
GGTGACAGAGTTCTGATAACAAAAGGAGCACTAGAAGATATTTTGAGCATATGTTCTTTC
ATTGAGCGCGTTGATGAGGGGAGGATTTTCGCTTTCACCAAAGAAGATTACAGAAGAATT
ACTGAGCTCTCAGAAAAATTAAGTAATGAAGGATATCGGGTTCTTGGGTTAGCAATGAAA
CAACCCCTACCGCAAGTTGGAGTTAGCAGCATGATCTGCGATAAGGACATTGAATCCAAT
ATGGTTTTTGTTGGGCTTATATCCTTCTTTGATCCACCAAAAGATTCTGCAAAAGAAGCG
CTGTGGCGCCTTGCAGAGAAGGGAGTAAAAGCTAAAGTATTGACAGGTGATACTCTATCT
CTTGCGATAAGAATATGCAAAGAGGTCGGTATTAAAACAACTCACGTCATCACTGGACCT
GACCTTGAGTCACTAGACACAGATTCTTTCCATGAGACAGTGAAGAGATCAACAGTTTTC
GCCCGACTCACACCTTCTCAGAAACTGAGGGTGGTGCAATCTTTACAAACAATGGGCGAT
CATGTTGTTGGTTTCTTAGGAGATGGAGTAAACGATTCGCTTGCATTGGATGCAGCAAAT
GTGGGCATATCTGTTGACTCCGGTGCTTCAATGGCCAAAGACTTTGCTAACATTATCTTA
CTCGAAAAAGACCTTAATGTTCTTGTAGCTGGAGTTGAGCAAGGTCGGCTCACATTTGGA
AACACGATGAAGTATATTAAAATGTCAGTGATCGCCAATCTAGGAAGCATAATTTCACTG
CTGATCGCGACATTAATTTTCGGATTTGAGCCCTTGACGCCAATGCAGCTTCTTACTCAA
AACATCTTGTATAATCTTGGCCAAATTGCAATACCTTGGGACAAAATGGAAGACGTTTAT
GTTCAAACTCCACAGAGATGGTCACTAAAAGGCTTAGCGACATTTACACTATGGAACGGA
CCTCTTTGTTCTGCATCCGATATAGCTACACTCTTATTCCTTTTGCTATATTACAAGGTT
TCAAGATTTGATTTTGAGTTTTTTCGTTCTGCTTGGTTCGTTGAAGGACTTCTGATGCAA
ACACTAATCATACACCTGATCCGAACAGAGAAAATCCCGTTTATCCAGGAGGTTGCATCA
TGGCCTGTTGTTTGTTCTACTGTTGTTATATCAACAATTGGAATTGTAATCCCATACACA
ACAATGGGAAATGTTCTAGGATTGACAGCCTTACCATTGTCATACTTTGGTTTTTTGGTT
GTCCTCTTCTTAGGTTATTTTTCATTTGGACAAATTATCAAGAGAGGCTACATTTTGGTG
TTCAAGACATGGCTTTAG

Peptide Sequence

PEP ID

XP_016509835.1
PEP Infomation

PREDICTED: magnesium-transporting ATPase, P-type 1-like [Nicotiana tabacum]
Sequence

MWLPNIFSANHPKIPYYNSPLIHQNLVHKLNGQTQHNGPKINVVFRFLQRLTSGKKIDGG
SRTVEEEKLYSWLYALAQSEKDLVYEYVRSTERGLSFAEADRRLKESGPNIPLENTFPKW
WNLLWIASFHPFNIILLFLSVISYITSDSPNGCIMLILVFISVSFRFYQEYSSSKAAMKL
AEFVRCPIKVQRCAGRIFQTEVQVKVDQKEVVPGDIVIVEPGDLFPGDVRLLESKHLVVS
QSSLTGESDTTEKTAYVREDNSTPLLDLKNICFMGTSVVSGSGTGLVISTGLKTYLSTIF
SKIGKKRPPDDFEKGIRHISYVLISVMLVVVTVIVLSVYFTSHDLSKSILFGISVASALT
PQMLPLIVNTGLAKGALAMAKDRCIVKSLTAIRDMGSMDIICIDKTGTLTVNFSTMVNYF
DSWGSPNETVLHFGFLNAYFQNQNKYPLDDAIMAYAYTNGYKFKPSKWNKIDEIPFDFTR
RRVSVILETKMSAKDEQMSIGDRVLITKGALEDILSICSFIERVDEGRIFAFTKEDYRRI
TELSEKLSNEGYRVLGLAMKQPLPQVGVSSMICDKDIESNMVFVGLISFFDPPKDSAKEA
LWRLAEKGVKAKVLTGDTLSLAIRICKEVGIKTTHVITGPDLESLDTDSFHETVKRSTVF
ARLTPSQKLRVVQSLQTMGDHVVGFLGDGVNDSLALDAANVGISVDSGASMAKDFANIIL
LEKDLNVLVAGVEQGRLTFGNTMKYIKMSVIANLGSIISLLIATLIFGFEPLTPMQLLTQ
NILYNLGQIAIPWDKMEDVYVQTPQRWSLKGLATFTLWNGPLCSASDIATLLFLLLYYKV
SRFDFEFFRSAWFVEGLLMQTLIIHLIRTEKIPFIQEVASWPVVCSTVVISTIGIVIPYT
TMGNVLGLTALPLSYFGFLVVLFLGYFSFGQIIKRGYILVFKTWL

Transcript Sequence

Gene sequence data has not been registered.